Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLYHYYFKTPKSFPLEYLHLCANESHLLRLDFDATNFSHHTPMNTPLKLSVQALERYFLGQLFEFDAPLDLIGTFFQKQVWSALMTIPYGKTKSYDEIAKLINNPKSCRAIGNANRNNPISLIVPCHRVVRKNGALGGYNGGIEVKKWLLEFESKILNERAKNFLIS
1QNT Chain:A ((93-173))
--------------------------------------------------------------------------SFTRQVLWKLLKVVKFGEVISYQQLAALAGNPKAARAVGGAMRGNPVPILIPCHRVVCSSGAVGNYSGGLAVKEWLLAHEGHRL----------
General information:
TITO was launched using:
RESULT:
Template:
1QNT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11993 for 571 contacts (-21.0/contact) +
2D Compatibility (PS) -8935 + (NN) -4173 + (LL) 5948
1D Compatibility (HY) -7600 + (ID) 1800
Total energy: -28553.0 ( -50.01 by residue)
QMean score : 0.553
(partial model without unconserved sides chains):
PDB file :
Tito_1QNT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QNT-query.scw
PDB file :
Tito_Scwrl_1QNT.pdb
: