Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKALKILSVGALLFVALNAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEKMPEDKRKAFHKQLHEYATKNTDKMTVADFEARQKAI--KEALKKGNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSDKH |
1UMY Chain:A ((132-175)) | -------------------------------------------------------KSETEVKKIFHQQLEVFMKKNVDFLIAEYFEHVEEAVWAVEALKTSGKPIAATMCIGPEGDLHGVSPGECAVRLVKAGAAIVGVNCHFDPSTSLQTIKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UMY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3352 for 194 contacts (17.3/contact) +
2D Compatibility (PS) -4434 + (NN) -2462 + (LL) 4772
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -1572.0 ( -8.10 by residue)
QMean score : 0.572
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