Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEFCVLFGGASFEHEISIVSAIALKGVLKDRIKYFIFLDENHYFYLIEESNMHSKYFAQIKEKKLPPLILTHNG-------LLKNSFLGAKIIELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPRVEASVLSYNKYLTKLYAKDLGVKALDYVLL----NEKNRANALDLIG--FNFPFIVKPSNAGSSLGVNVVKEEKELIYALDSAFEYSKEVLIEPFIQGVKEYNLAGCKIKKGFC-FSYVEEPNKQ-EFLDFKQKYLDFSRTKAPKANLSNALEEQLKENFKKLYNDLFDGAIIRCDFFVIE-NEVYLNEINPIPGSLANYLFDDFKTTLENLAQSLPK--TPKIQVKNSYLLQIQKNK |
| 2I80 Chain:A ((6-352)) | --ICIVFGGKSAEHEVSILTAQNVLNAI-DKDKYHVDI-----IYITNDGDWRKQNNITAEIKSTDELHL-ENGEALEISQLLKESSSGQP---YDAVFPLLHGPNGEDGTIQGLFEVLDVPYVGNGVLSAASSMDKLVMKQLFEHRGLPQLPYISFLRSEYEKYEHNILKLVNDKLNYPVFVKPANLGSSVGISKCNNEAELKEGIKEAFQFDRKLVIE---QGVNAREIEVAVLGNDYPEATWPGEVVKDVAF-----------VQLQIPADLDEDVQLTLRNMALEAFKATDCSGLVRADFFVTEDNQIYINETNAMPGFTA---FSMYPKLWENMGLSYPELITKLIELAKERHQDKQKNK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I80.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138536 for 2590 contacts (-53.5/contact) +
2D Compatibility (PS) -34885 + (NN) -18804 + (LL) 2184
1D Compatibility (HY) -19200 + (ID) 4950
Total energy: -214191.0 ( -82.70 by residue)
QMean score : 0.386
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