Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNSPDVLLDSFKIALVKKDSKLAFSLIERLSLEQIKSLDLDALLSLKEMIAQSIELLEKEKEELQSQMHKAKQIQKFLS |
1YKH Chain:B ((71-83)) | --------------------RQINKLIDSLPGVDVSAEEQLRKIDMLQKKLVEVEDEKIEAIKKKEKLMRHVDSMIEDF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YKH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 694 for 41 contacts (16.9/contact) +
2D Compatibility (PS) -1375 + (NN) -540 + (LL) 1260
1D Compatibility (HY) 0 + (ID) 150
Total energy: -111.0 ( -2.71 by residue)
QMean score : 0.019
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