Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALLEIIHYPSKILRTISKEVVSFDSKLHQQLDDMHETMIASEGIGLAAIQVGLPLRMLIINLPQEDGVQHKEDCLEIINPKWIETKGSIMYREGCLSVPGFYEEVERFEKVKIEYQNRFAEVKILEASELLAVAIQHEIDHLNGVLFVDKLSILKRKKFEKELKELQKKQKHK
4E9B Chain:A ((1-163))
-ALLEIIHYPSKILRTISKEVVSFDAKLHQQLDDMYETMIASEGIGLAAIQVGLPLRMLIINLPQEDGVQHKEDCLEIINPKFIETGGSMMYKEGCLSVPGFYEEVERFEKVKIEYQNRFAEVKVLEASELLAVAIQHEIDHLNGVLFVDKLSILKRKKFEKEL----------
General information:
TITO was launched using:
RESULT:
Template:
4E9B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79543 for 1247 contacts (-63.8/contact) +
2D Compatibility (PS) -17313 + (NN) -2300 + (LL) 1092
1D Compatibility (HY) -26400 + (ID) 7800
Total energy: -132264.0 ( -106.07 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_4E9B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4E9B-query.scw
PDB file :
Tito_Scwrl_4E9B.pdb
: