Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKNKPTECPAGEKWAVPYADFLSLLLALFIALYAISAVNKSKVEALKTEFIKIFNYAPKPEAMQPVVVIPPDSGKEEEQMASESSKPASQNTETKATIARKGEGSVLEQIDQGSVLKLPSSLLFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRGFTDNTPLNKTRFKSHYELAANRAYRVMKVLIQYGVDPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTDANDLSKIHSILDEEFNPHKQQE
3S02 Chain:A ((106-251))
----------------------------------------------------------------------------------------------------------SVLEQIDQGSILKLPSNLLFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTDANDLSKIHSILDNEFNP-----
General information:
TITO was launched using:
RESULT:
Template:
3S02.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68375 for 1003 contacts (-68.2/contact) +
2D Compatibility (PS) -16461 + (NN) -15559 + (LL) 7912
1D Compatibility (HY) -20000 + (ID) 7000
Total energy: -119483.0 ( -119.13 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_3S02.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S02-query.scw
PDB file :
Tito_Scwrl_3S02.pdb
: