Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNIYVGNLVYSATSEQVKELFSQFGKVFNVKLIYDRETKKPKGFGFVEMQE-EGVREAIAKLDNTDFMGRTIRVTEANPKKS
3B4D Chain:A ((172-248))
-RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLA-LDESLFRGRQIKVI---PKR-
General information:
TITO was launched using:
RESULT:
Template:
3B4D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45670 for 521 contacts (-87.7/contact) +
2D Compatibility (PS) -8105 + (NN) -872 + (LL) 412
1D Compatibility (HY) -7600 + (ID) 1600
Total energy: -63435.0 ( -121.76 by residue)
QMean score : 0.738
(partial model without unconserved sides chains):
PDB file :
Tito_3B4D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3B4D-query.scw
PDB file :
Tito_Scwrl_3B4D.pdb
: