Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFLVKKIGVVIMILVCFLACSQESFIKMQKKAQEQENDGSKRPSYVDSDYEVFSETIFLQNMVYQPIEERNAFFQLTKDEDNSFNPENSVILLNEPSDNSEKNLLSYPNDPNNNEDNANNSQKNPFLYKPKRKTKNPKLIEYSQQDFYPLKNGDIIMSKEGDQWLIEIQSKALKRFLKDQNDKDRQIQTFTFNDTKTQIAQIKGKISSYVYTTNNGSLSLRPFYESFLLEKKSDNVYTIENKALDTMEISKCQMVLKKHSTDKLDSQHKAISIDLDFKKERFKSDTELFLECLKES |
| 2LOX Chain:B ((22-33)) | ------------------------------------------------DLEVLSEELFED-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2LOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -306 for 27 contacts (-11.3/contact) +
2D Compatibility (PS) -1187 + (NN) 485 + (LL) 17316
1D Compatibility (HY) -1600 + (ID) 300
Total energy: 14408.0 ( 533.63 by residue)
QMean score : -0.353
|
|
|