Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVGLIGVVEKISALEAHIEVQGVVYGVQVSMRT-AALLQTGQKARLKILQVIKEDAHLLYGFLEESEKILFERLLKINGVGGRIALAILSSFSPNEFENIIATKEVKRLQQVPGIGKKLADKIMVDLIGFFIQDENRPARNEVFLALESLGFKSAEINPVLKTLKPHLSIEAAIKEALQQLRS
1D8L Chain:A ((19-128))
------------------IEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLF--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1D8L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85290 for 722 contacts (-118.1/contact) +
2D Compatibility (PS) -11951 + (NN) -2001 + (LL) 5160
1D Compatibility (HY) -10400 + (ID) 2500
Total energy: -106982.0 ( -148.17 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_1D8L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D8L-query.scw
PDB file :
Tito_Scwrl_1D8L.pdb
: