Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNFEKIIAQNRLKTNAVLTTYCAIFAFIGLLVDAIRINANDLGIALFKLMTFQIFPTITIVMFVVAFVIILVCIQNFSSIMLSGDEYKLIDP-SKVLSSKENQIHRLLLELLEEAKLHFEPK-LYIINAPYMNAFASGWDESNSLIALTSALIERLDRDELKA---------VIAHELSHIRHNDIRLTMCVGILSNIMLLVANFSVYFFMGNRKNSGANLARMILWVLQIILPFLTLLLQMYLSRTREYMADSGAAFLMHDNKPMIRALQKISNDYTNNDYKEIDKNSTRSAAYLFNAEMFSTHPSIKNRIQSLRKRVI |
4JEM Chain:A ((16-139)) | ------------------------------------------------------------------------------GSVFLGGPFRQLVDPRTGVMSSGDQNVFSRLIE-------HFESRGTTVYNAHRREAWGAEF--------LSPAEATRLDHDEIKAADVFVAFPGVPASPGTH-----VEIGWASGMGKPMVLLLERDEDYAFLVTGLESQANVEILRFSGTEEIVERLDGAVARVLGRAGEPTV-------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JEM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38011 for 725 contacts (-52.4/contact) +
2D Compatibility (PS) -12128 + (NN) -5008 + (LL) 16032
1D Compatibility (HY) -6400 + (ID) 1850
Total energy: -47365.0 ( -65.33 by residue)
QMean score : 0.099
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