Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEHKEIVIGVDIGSRKICAIVAEFKDGILRIIGTAHQDSKEINSKAIK-RGRINSLAHASNAIKEVINSAKKMAGLNADEDRNNPISSFRESYHPKTKAIVSFSGAYTESIRDVTGVA---STKDNVVTIDEINRAINNACAKAGLDNDKHILHALPYRFTLDKQE-VNDPLGMSGTRLEV-FIHIVYTEK--NNIENLEKIMIQSGVEIENIVINSYAASIATLSNDERELGVACVDMGGETCNLTIY-SGNSIRYNKYLPVGSHHLTTDLSHMLNTPFPYAEEVKIKYGDLSFESGAETPSQSVQIPTTGSDGHESHIVPLSEIQTIMRERALET-------FKIIHRSIQDSGFEEHLGGGVVLTGGMALMKGIKELARTHFTNYPVRLATPV--EKYNIMGMFEDLKDPRFSVVVGLILYKAGGHTNYERDSKGIIRYHESDDYIRKAHQSNPTPHIHSSPTERNLSDLKTPSAPLNTAKNDDFLPIKPTEQKGFFQNLLDKISKIF |
4A2A Chain:A ((13-386)) | ---------IDIGSRYIKGLV----------LGK----WEALAFSSVKSRGLDEGEIKDAIAFKESVNTLLK-------ELEEQLQKSLRSDF------VISFSSVSFE--REDTVIERDFGEEKRSITLDILSEMQSEALEKLK-ENGKTPLHIFSKRYLLDDERIVFNPLDMKASKIAIEYTSIVVPLKVYEMFYNFLQDTVKSPFQLKSSLVST---AEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIKIS-YVPVGMKHVIKDVSAVLDTSFEESERLIITHGNAVYNDLKEE-----EIQYRGLDGNTIKTTTAKKLSVIIHARLREIMSKSKKFFREVEAK---------IPGGVVLTGGGAKIPRINELATEVFKS-PVRTGCYANSDRPSIINADEVANDPSFAAAFGNVFA--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4A2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106427 for 2736 contacts (-38.9/contact) +
2D Compatibility (PS) -37221 + (NN) -14141 + (LL) 7592
1D Compatibility (HY) -16800 + (ID) 5000
Total energy: -171997.0 ( -62.86 by residue)
QMean score : 0.424
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