Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMFELTKKTKFDGEMIGYTEELLTFLV----RDFFNGIFKSKVIPKMPIFCGDVKCEDFNALRSLVYLSVLELEETINPNKIPF
4HVC Chain:A ((424-463))
------------------SEDLKTHMVVANTMEDFQKILDSGKIVQIP-FCGEIDCEDWIKKTTARMGAKSLCIPFKPLCELQP
General information:
TITO was launched using:
RESULT:
Template:
4HVC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13829 for 147 contacts (-94.1/contact) +
2D Compatibility (PS) -3976 + (NN) -2030 + (LL) 1648
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -22537.0 ( -153.31 by residue)
QMean score : 0.077
(partial model without unconserved sides chains):
PDB file :
Tito_4HVC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HVC-query.scw
PDB file :
Tito_Scwrl_4HVC.pdb
: