Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRAFLNRSFAPLLNPNENLLDQVKSSIILKKGVSYFDWGASGLASALVEKRVKSLLPYYANAHSVASKHAILMGMLLKECQEKLKRSLNLSANHCVLSAGYGASSAIKKFQEILGVCIPSKTKKNLEPYLKDMALKRVIVGPYEHHSNEVSWR---EGLCEVVR-IPLNEHGLLDLEILEQTLKKTPNSLVSVSAASNVTGILTPLKEVSSLCKEYRAILALDLANFSAHANPKDCEYQTGF-YAPHKLLGGVGGCGLLGISKDLIDTQIPPSFSAGGVIKYANRTRHEFIDELPLREEFGTPGLLQFYRSALAYQLRDECGLDFIHKKENNLLRVLVYGLKDLPAINIYG---NLTASRVGVVAFNIGGISPYDLARVLSYEYAIETRAGCSCAGPYGHDLLNLNAQKSSDFNAKPGWLRVSLHFTHSINDIDYLLDSLKKAVKKLR |
| 4Q76 Chain:A ((130-422)) | ----------------------------------------------------------------------------------------------------------------------------------------EVILTVAEHHSCIVPWQIVSQKTGAVLKFVTLNEDEVPDINKLRE-LISPKTKLVAVHHVSNVLASSLPIEEIVVWAHDVGAKVLVDACQSVPHMVVDVQKLNADFLVASSHKMCGPTGIGFLYGKSDLLHSM--PPFLGGGEMISDVFLDHSTYAEPPSRFEAGTPAIGEAIALGAAVDYLSGIGMPKIHEYEVEIGKYLYEKLSSLPDVRIYGPRPSESVHRGALCSFNVEGLHPTDLATFLDQQHGVAIRSGHHSAQPL-HRYLGVNASA-----------RASLYFYNTKDDVDAFIVALADTVSFFN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q76.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131104 for 2177 contacts (-60.2/contact) +
2D Compatibility (PS) -30845 + (NN) -12466 + (LL) 9916
1D Compatibility (HY) -13600 + (ID) 4150
Total energy: -182249.0 ( -83.72 by residue)
QMean score : 0.357
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