Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDKRIKTLLLFFGLNMVCLSVSFTNKPHLCFWFLVLGCYLVYEWQKKQKKDFQSAKSLKFDSVSELEKDLNMEVTNDEWDTIKKLNEKLKMFFNVENAIYVFLLVSYLIVGMRVTLSLIDNHGVLK
3ICQ Chain:T ((389-446))
--------------------------------------------------------KKMKYDESQEWDDDPDSE----EEAEFQEMRKKLKIFQDTINSIDSSLFSSYMYSAITSSLSTAATLSPEN
General information:
TITO was launched using:
RESULT:
Template:
3ICQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9003 for 258 contacts (-34.9/contact) +
2D Compatibility (PS) -6018 + (NN) -2701 + (LL) 5116
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -15106.0 ( -58.55 by residue)
QMean score : 0.168
(partial model without unconserved sides chains):
PDB file :
Tito_3ICQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ICQ-query.scw
PDB file :
Tito_Scwrl_3ICQ.pdb
: