Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDQLQIVPKAQVLKNNTMERSLALALQKVSIPRSTSAHRTLLINHFLEQVILQNIKT----IAFRGIIKLTPHNE-----NP---LLKPYSAFITL---NSIIRACAYCPL
1DQI Chain:A ((45-113))
-------------------------------------------TEHHIRYIELYFLPEGENFVYQVGRVEFTAHGESVNGPNTSDVYTEPIAYFVLKTKKKGKLYALSYCNI
General information:
TITO was launched using:
RESULT:
Template:
1DQI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19550 for 282 contacts (-69.3/contact) +
2D Compatibility (PS) -6017 + (NN) -1995 + (LL) 4060
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -27302.0 ( -96.82 by residue)
QMean score : 0.115
(partial model without unconserved sides chains):
PDB file :
Tito_1DQI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DQI-query.scw
PDB file :
Tito_Scwrl_1DQI.pdb
: