Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFSVLTLFPQLILPYFEDSILKRALEKNLFELEVLNLRDFSANKYQKADHTLIGGGAGQILDPEMIENALHSVKNPKH----TIFLSAVGKPFKQIDAMRLAQKKHVVLVCGRYEGFDERSIELGADEVFCIGDFILTGGELGALCLIDSIARHIQGVLGNAQSLENESFENNYLETPNFANAVFKSKEINKIPAPLEYSKGNHAKIKQLKLDLSKLRTKFYRLDLFKQHKS
3AXZ Chain:A ((21-245))
MWIGVISLFPEMFKAITEFGVTGRAVKHNLLKVECWNPRDFTFDKHKTVDDRPYGGGPGMLMMVQPLRDAIHTAKAAAGEGAKVIYLSPQGRKLDQGGVTELAQNQKLILVCGRYEGIDERLIQTEIDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVL-----------ADGLLDCPHYT----RPEVLEGLTVPPVLMSGHHEEIRKWRLKQSLQRTWLRRPELLEGLAL
General information:
TITO was launched using:
RESULT:
Template:
3AXZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126384 for 1503 contacts (-84.1/contact) +
2D Compatibility (PS) -22765 + (NN) -9375 + (LL) 780
1D Compatibility (HY) -16000 + (ID) 3850
Total energy: -177594.0 ( -118.16 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_3AXZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AXZ-query.scw
PDB file :
Tito_Scwrl_3AXZ.pdb
: