Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTPHINAKIGDFYPQCLLCGDPLRVSYIAKNFLQDAKEITNVRNMLGFSGKYKGKGISLMGHGMGIASCTIYVTELIKTYQVKELLRIGTCGAISPKVGLKDIVMATGASTDSKTNRVRFLNHDLSATPDFELSLRAYQTAKRLGIDLKIGNVFSSDFFYSFETHAFGLMAQYNHLAIEMEAAGLYATAMELNAKALCLCSVSDHLITKEALSPKERIESFDNMITLALEMMS
1PR5 Chain:A ((3-231))
-TPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLRDVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLFYSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHI------TAAERQTTFNDMIKIALESVL
General information:
TITO was launched using:
RESULT:
Template:
1PR5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -183677 for 1945 contacts (-94.4/contact) +
2D Compatibility (PS) -23296 + (NN) -6125 + (LL) 952
1D Compatibility (HY) -24800 + (ID) 6100
Total energy: -243046.0 ( -124.96 by residue)
QMean score : 0.479
(partial model without unconserved sides chains):
PDB file :
Tito_1PR5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PR5-query.scw
PDB file :
Tito_Scwrl_1PR5.pdb
: