Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQKRVVILLLDSFGIGASEDAKDFGDLGANTLGNIAKACFNNLADSNDRNGVLKLPNLEGLGLG-LSALKAAN--ELPLGFQLKPNLIGAYAYAKELSSAKDTISGHWEMMGAPVLFEWGYFKDKNDSFPKEILDEIMHKTKIKGYLGNCHASGTEIIKDLGEKHLETLYPIFYTSADSVFQIAAHEERFGLDHLYALCEEAFQIL--EPLKIARVIARPFIGTNRENFKRTANRKDYAIKPHKKLLFETFIEEKQGEVISIGKIADIYAHVGITQKFKAGSLMELCDVTLDQVKNAPNNSLIFTNFVHFDSDYGHRRDVSGYANALEYFDARLKEVLDNLRENDLLILCADHGCDPSFKGTDHTREYIPVLFYHKDLQPAF--LGKSETFADIGQSIAYFLGLSPLDYGKNLLNFKGQP |
3OT9 Chain:A ((10-395)) | --KRIFLVVMDSVGIGEAPDAEQFGDLGSDTIGHIAEHM----------NG-LQMPNMVKLGLGNIREMKGISKVEKPLGY---------YTKMQEKSTGKDTMTGHWEIMGLYIDTPFQVFPE---GFPKELLDELEEKTGRK-IIGNKPASGTEILDELGQEQMETGSLIVYTSADSVLQIAAHEEVVPLDELYKICKIARELTLDEKYMVGRVIARPFVG-EPGNFTRTPNRHDYALKPFGRTVMNE-LKDSDYDVIAIGKISDIYDGEGVTESLRTKSNMDGMDKLVDTL-NMDFTGLSFLNLVDFDALFGHRRDPQGYGEALQEYDARLPEVFAKLKEDDLLLITADHGNDPIHPGTDHTREYVPLLAYSPSMKEGGQELPLRQTFADIGATVAENFGVKMPEYGTSFLNEL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OT9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -296413 for 3491 contacts (-84.9/contact) +
2D Compatibility (PS) -40224 + (NN) -10443 + (LL) 1152
1D Compatibility (HY) -32800 + (ID) 9000
Total energy: -387728.0 ( -111.07 by residue)
QMean score : 0.548
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