Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKTFLIALALTASLIGAENTKWDYKNKENGPHRWDKLHKDFEVCKSGKSQSPINIEHYYHTQ-DKADLQFKYAASKPKAVFFTHHTLKASFEPTNHINYRGHDYVLDNVHFHAPMEFLINNKTRPLSAHFVHKDAKGRLLVLAIGFEEGKENPNLDPILEGIQKKQNLKEVALD------AFLPKSINYYHFNGSLTAPPCTEGVAWFVIEEPLEVSAKQLAEIKKRMKNSPNQRPVQPDYNTVIIKSSAETR |
4G7A Chain:A ((25-247)) | ---------------------EWSYEG-EKGPEHWAQLKPEFFWCKL-KNQSPINIDKKYKVKANLPKLNLYYKTAKESEVVNNGHTIQINIKEDNTLNYLGEKYQLKQFHFHTPSEHTIEKKSYPLEIHFVHKTEDGKILVVGVMAKLGKTNKELDKILNVAPAEEG--EKILDKNLNLNNLIPKDKRYMTYSGSLTTPPCTEGVRWIVLKKPISISKQQLEKLKSVMVN-PNNRPVQEINSRWIIEGF---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4G7A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -93070 for 1664 contacts (-55.9/contact) +
2D Compatibility (PS) -23079 + (NN) -6493 + (LL) 2512
1D Compatibility (HY) -18400 + (ID) 4400
Total energy: -142930.0 ( -85.90 by residue)
QMean score : 0.450
|
|
|