Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEDYAISLEEVNFNDFIVVDVRELDEYEELHLPNATLISVND-QEKLADFLSQHKDQKVLLHCRAGRRALDAAKSMHELGYTPYYLEGNVYDFEKYGFRMVYDDTSLSDKKN
2JTS Chain:A ((5-78))
-------------------IDVRVPEQYQQEHVQGAINIPLKEVKERIATAVPD-KNDTVKVYCNAGRQSGQAKEILSEMGYTHVENAGGLKDIAMPKVKG------------
General information:
TITO was launched using:
RESULT:
Template:
2JTS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27138 for 526 contacts (-51.6/contact) +
2D Compatibility (PS) -7787 + (NN) -2421 + (LL) 2580
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: -39066.0 ( -74.27 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_2JTS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JTS-query.scw
PDB file :
Tito_Scwrl_2JTS.pdb
: