Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIVKRLNPDALKSALQKIGPEKIAQTHMRQKGVSFVFEIQHLPLSAALILKQEAISVGGDFATPRDCILAKEPFYDGVLIASAKQLERLIVKCHSQPFGLKHLAQELKSHLKAKKPNAPQIMAILNLTPDSFYEKSRFDSK-KALEEIYQWLEKGITLIDIGAASSRPQSEIIDPKVEQDRLKEILLEIKSQKLYQRAQFSIDTYHATTAQMALEHYFSILNDVSGFNSIEMLEVARDYQ-PTCILMHAQKTPKDMQENVFYHNLFDEMDRFFKEKLEVLEKYTL--QDIILDIGFGFAKLKEHNLALIKHLSHFLKFKKPLLVGASRKNTIGLITGREVQDRLAGTLSLHLMALQNGASILRAHDIDEHIDLIKVFKSLEETD |
| 1AJ2 Chain:A ((15-271)) | ----------------------------------------------------------------------------------------------------------------------PHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVV-EAIAQRF--EVWISVDTSKPEVIRESAKVGAHIINDIRSLSEPGALEAAAETGLPVC-LMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGMSRKSMIGQLLNVGPSERLSGSLACAVIAAMQGAHIIRVHDVKETVEAMRVVEATLSAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137082 for 2112 contacts (-64.9/contact) +
2D Compatibility (PS) -27638 + (NN) -17096 + (LL) 9904
1D Compatibility (HY) -14800 + (ID) 4350
Total energy: -191062.0 ( -90.46 by residue)
QMean score : 0.511
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