Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFHEFRDEISVLKANNPHFDKIFEKHNQLDD------DIK--TAEQQNASDAEISHMKKQKLKLKDEIHSMIIEYREKQKSERA
3CQP Chain:A ((47-99))
-VHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLRNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKG
General information:
TITO was launched using:
RESULT:
Template:
3CQP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4780 for 167 contacts (28.6/contact) +
2D Compatibility (PS) -4321 + (NN) 1228 + (LL) 208
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -55.0 ( -0.33 by residue)
QMean score : 0.222
(partial model without unconserved sides chains):
PDB file :
Tito_3CQP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CQP-query.scw
PDB file :
Tito_Scwrl_3CQP.pdb
: