Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNLVILSGAGISAESGIKTFRDAGGLWEGHDIMEVASPYGWKKNPQKVLDFYNQRRRQLFEVYPNKAHKALAELEKHYQVN-IITQNVDDLHERAGSSRILHLHGELLSVRSEKDPNLVYRWEKDLNLGDLAQ-DKAQ--LRPDIVWFGEEVP--LLKEAVSLVKQVHLLIIIGTSLQVYPAASLYTHANKDALIYYIDPKAKNARLPQNVQCINENAVHAMQDLMPKLIEMASQEMLK |
1M2H Chain:A ((13-196)) | -KYLVALTGAGVAAESGIPTFRGKDGLWNRYRPEELANPQAFAKDPEKVWKWYAWRMEKVFNAQPNKAHQAFAELERLGVLKCLITQNVDDLHERAGSRNVIHLHGSLRVVRCTSCNN-SFEVESAPKIPPLPKCDKCGSLLRPGVVWFGEMLPPDVLDRAMREVERADVIIVAGTSAVVQPAASLPLIVKQRGGAIIEINPDETPLTPIADYSLRGKAGEVMDELVRHVRKALSLKLN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M2H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75334 for 1370 contacts (-55.0/contact) +
2D Compatibility (PS) -18978 + (NN) -6046 + (LL) 476
1D Compatibility (HY) -13200 + (ID) 4300
Total energy: -117382.0 ( -85.68 by residue)
QMean score : 0.465
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