Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKDILNALYHQKDLNDEEVKKLFTLIIDEKVSPAQLGAVLCALKIKGESFKEISVAATTLLEHAPKPFNSGLDL---IDNCGTGGDGLKTINISTIAALIASSMGLSMAKHGSRSVSSHSGSADLLENLGVNIEMNPMQLENCFKQSHFGFLFAPLYHQSFKKSAPLRKELFTKTIFNCLGPLINPLRPKIQLLGVYDKSLCKTMALALKALGVKRAMVVNG-GGTDEIVLHDITHACELKNNEILEYDLSAKDFDLPPYDLKELQIENAKES----VQACLDILENKGKDSHTM-VVAANVASLLYLSHRAKDLKEGVSMTLEHLKTKAPYAHLQKIIRLSHA |
| 1O17 Chain:A ((3-319)) | INEILKKLINKSDLEINEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIK-----IDVPNAIDTAG----GLGTVNVSTASAILLSLVN-PVAKHGNRAVSGKSGSADVLEALGYNIIVPPERAKELVNKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKIILVYGEPGIDEVSPIGNTFMKIVSKRGIEEVKLNVTDFGISPIPIEKLIVNSAEDSAIKIVRAFL------GKDEHVAEFIKINTAVALFALDRVGDFREGYEYA-DHLIEKSLDKLNEIISMNGDV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O17.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206164 for 2650 contacts (-77.8/contact) +
2D Compatibility (PS) -32433 + (NN) -19550 + (LL) 88
1D Compatibility (HY) -24000 + (ID) 5800
Total energy: -287859.0 ( -108.63 by residue)
QMean score : 0.577
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