Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHDFLKAFKDAFPHTISIFLGYLLMGMTFGMLLAQQGYDYKVALFMSLFIYAGAIQFVAITLLSAQASLMNVVIVSLLVNA---RQTCYALSMLDRFKNTKWRLPYLAHALTDETFALLNLYAPKKGVNETDFMFSISLLNHSYWIFGSLVGSLVGSHFSFDTQGMEFVMTAIFIVLFMEQYKRNTNHKNAWLGIAIAVVCLALFGTEYFLLIALVLMVLALILFRKQLEC
4RGA Chain:A ((198-273))-----------------------------------------------------------------------VAVQSIPINGVANRPVSSTASQLTNYK--VWRNPYLCSQDPRDKFAPDNLVIEEDGIYRIDISGSINIANYTFPASGNSWRVGGRYFQIVCARNSSANNLAEFGAEQHLPPSGVWTRRVLVGEYTAGMTEQAFSSVATISLFKGDNFFLQFETGTNTSRD


General information:
TITO was launched using:
RESULT:

Template: 4RGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7892 for 284 contacts (-27.8/contact) +
2D Compatibility (PS) -6948 + (NN) 6492 + (LL) 6776
1D Compatibility (HY) 0 + (ID) 1100
Total energy: -2672.0 ( -9.41 by residue)
QMean score : -0.278

(partial model without unconserved sides chains):
PDB file : Tito_4RGA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RGA-query.scw
PDB file : Tito_Scwrl_4RGA.pdb: