Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKIELLAKFTQIALPNSHPLLKKVLNYAKKHFSQCHMLSSSLLILNDTECFKKNYLLNWVYHALECAHEKDISMHSLEEILQKSHLPIRIKIMAQNTLLEKIEVKVLTFGAEYALFITKHPIAKRFLRQKFSGCVFLETQDELHIRGDSERFWELIVTLNENRIVHNACLDFIYPNGFGKDSYTTMAERKLKECYKALGFIKHENFSEVKKRYLELAKTYHPDLCDLKEKKALYAKRFAIIQEAYSHIKKHA |
| 4J7Z Chain:A ((4-54)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KDYYAILGVPRNATQEEIKRAYKRLARQYHPDVNKSPEAE----EKFKEINEAYAVLSDPE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J7Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6789 for 295 contacts (-23.0/contact) +
2D Compatibility (PS) -5568 + (NN) -4189 + (LL) 16992
1D Compatibility (HY) -2400 + (ID) 950
Total energy: -2904.0 ( -9.84 by residue)
QMean score : 0.787
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