Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKLFDYAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFCAFNLTPPYAVKIILLGQDPYHSTYLENEQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVPV-PCCGDLSAWAKRGMLLLNAILSVEKNQAASHKYIGWEAFSDQILIRLFETTTPLIVVLLGKVAQKKIALIPKNKHIIITAPHPSPLS--RGFLGSGVFTSVQKAYREVYRKDFDFSL
1UGH Chain:E ((88-301))-----------SWKKHLSGEFGKPYFIKLMGFVAEERKH-YTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGP---NQ-----AHGLCFSVQRPVPPPPSLENIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWKE


General information:
TITO was launched using:
RESULT:

Template: 1UGH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -129231 for 1677 contacts (-77.1/contact) +
2D Compatibility (PS) -22404 + (NN) -10502 + (LL) 1608
1D Compatibility (HY) -14800 + (ID) 4450
Total energy: -179779.0 ( -107.20 by residue)
QMean score : 0.606

(partial model without unconserved sides chains):
PDB file : Tito_1UGH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UGH-query.scw
PDB file : Tito_Scwrl_1UGH.pdb: