Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSNKKSNHLRAIYRALVIAIGLAVIIVFNYFNRKNNNARSSRRACSCFFSLTGVNLEKIGSFDTGAKLIVLNHQSLLDIIYLEAYHPSNICWIAKKELGEIPFYGHALTDTGMILIDREDKKGIVSLLKACKEKLDQNRPLVIFPEGTRGKGGEKFLPFKQGAKIIAEKFQLKIQPMVLINSIKIFNSKPLEAYKARTRLVMLESY-----TPDFSSPTWYEELQERMQKEYLKHYHELNA |
1L7V Chain:C ((58-92)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FAGQPLEAWSA-TKLALHRAYLSQQQTPPFATPVWHYLTLHQHDKTRTELLNDVAG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1L7V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -2902 for 110 contacts (-26.4/contact) +
2D Compatibility (PS) -3223 + (NN) -2898 + (LL) 13652
1D Compatibility (HY) -2000 + (ID) 700
Total energy: 1929.0 ( 17.54 by residue)
QMean score : 0.073
|
|
|