Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLETTIDFSRYSSVKIGAPLKVSVLENDNEISQ----EHQIIGLANNLLI----APD-VKNLALLGKNYDYICDKGEWVEVGGAANASKIFNYFRANDLEGLEFLGQLPGTLGALVKMNAGMKEFEIKNVLESACV--NGEW--LEKEALGLDYRSSGF--NGVVLRARFKKTHGFREGVLKACKSM---RKSHPKLPNFGSCFKNPPNDYAGRLLEGVGLRGYCLKRVGFAKEHANFLVNLGGAEFEEALDLIELAKTRVLQEYGIHLEEEVKILR |
2GQU Chain:A ((14-251)) | ----------YTTLGVGGPAELWTVETREELKRATEAPYRVLGNGSNLLVLDEGVPERVIRLAGEFQTYDL---KG-WV--GAGTLLPLLVQEAARAGLSGLEGLLGIPAQVGGAVKMNAGTRFGEMADALEAVEVFHDGAFHVYCPEELGFGYRKSHLPPGGIVTRVRLKLKERPKEEILRRMAEVDRARKGQPKRKSAGCAFKNPPGQSAGRLIDERGLKGLRVGDAMISLEHGNFIVNLGQARAKDVLELVRRVQEELPLELEWEVWP------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104446 for 1700 contacts (-61.4/contact) +
2D Compatibility (PS) -23371 + (NN) -4720 + (LL) 2148
1D Compatibility (HY) -13200 + (ID) 3950
Total energy: -147539.0 ( -86.79 by residue)
QMean score : 0.370
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