Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTHVFEVYPKVNVFLKILHK-EGAYHKIISRMCLVKNKLKDIISVKNALSFSLKGDFDCPLEENSLFKALQVLKKFL-VQKNFSHSVIKSLDTLAIEVEKNIPTQAGLGGGSADAGGLLYHLNQMFDWRLSLKELYTMGSLVGADTNFFISQYKSANATSYGEVIENFEEESLEDRLEIYAPNHVFCSTKAVYQAYKPETCFFQAKEWLKKTSLECLKTYDRNELNDLLKPALR-----TNPALKDIESQLSKEWFFSGSGSAFFRLKNTQKGANETHCQQ |
| 2V8P Chain:A ((12-246)) | ---------KINLGLWVLGRLPSGYHEILTLYQEIP--FYDEIYIREGV-LRVETNIGIPQEENLVYKGLREFERITGIEINYS-----------IFIQKNIPPGAGLGGGSSNLAVVLKKVNELLGSPLSEEELRELVGSISADAPFFLLG-KSAIGRGKGEVLEPVETE-ISGKITLVIP-QVSSSTGRVYSSLREE--HFVTPEYAEE-KIQRIISGEVEEIENVLGDIARELYPEINEVYRFVE-YLGFKPFVSGSGSTVYFFGGASEELKKAAKMR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V8P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99159 for 1834 contacts (-54.1/contact) +
2D Compatibility (PS) -24041 + (NN) -6916 + (LL) 1868
1D Compatibility (HY) -18000 + (ID) 3450
Total energy: -149698.0 ( -81.62 by residue)
QMean score : 0.278
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