Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKIGIYPGTFDPVTNGHIDIIHRSSELFEKLIVAVAHSSAKNPMFSLDERLKMMQLATKSFKNVECVAFEGLLADLAKEYHCKVLVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTLQNAFISSSIVRSIIAHKGDASHLVPKEIYPFISKV
1H1T Chain:A ((2-151))
-QKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKPMFTLEERVALAQQATAHLGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAK
General information:
TITO was launched using:
RESULT:
Template:
1H1T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105982 for 1150 contacts (-92.2/contact) +
2D Compatibility (PS) -15817 + (NN) -3247 + (LL) 208
1D Compatibility (HY) -15600 + (ID) 3650
Total energy: -144088.0 ( -125.29 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_1H1T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H1T-query.scw
PDB file :
Tito_Scwrl_1H1T.pdb
: