Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MCGIVGYIGDSEKKSILLEGLKELEYRGYDSAGLAVLSANRLEVFKTQGKLENLRTELKNKEFLNFGVSIAHTRWATHGKPSSANAHPHFTENLALVHNGIIENYASLKKELENKGHAFLSQTDTEVIAHLLEETLKSEGDLLKAFEKSISLLKGSYAILMLHKRAKESLFYAKSSSPLIVGKGKEGVFFASSLSVLAPKVDQFVILEENSVGQISLENFKDLNNIENMKDYAFENKDY-SKGNFRNYLEKEIYEQHSSLLECLEGRLEALSV-YCEIDP---EFLENVSEITLCSCGSSYHASLASVYLFERLAKIRARAILASEYRYAHFKSNPNELFIAISQSGETADTLEALKLAKAQG-LKTISLCNAPFSMMSRISDHTLLIRAGVERSVASTKAFSSQVMLLWLLSVYLGKQLG-TISKEEERIQAKNMLNSVKAMKVEPKLHE--KIKRLSKRYLHGHGFFYIGRDVFYPLALEGALKLKEISYLHAEGYASAEMKHGPIALVDSNLFTIALLSKHLLFDKTKSNIEELSARDSTICVLSSEILE-IADD---FIQLEESESYMEEFFRMNLAMQLLALEIAMRLNHDVDHPRNLAKSVTVE |
| 2VF5 Chain:X ((243-608)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQVDLSELGPNADELLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMTNAGTEIGVASTKAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPS----RIEQMLSQDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPLALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHIIEMPHVEEVIAPIF-YTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2VF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -207341 for 3146 contacts (-65.9/contact) +
2D Compatibility (PS) -37637 + (NN) -14850 + (LL) 16916
1D Compatibility (HY) -30800 + (ID) 7550
Total energy: -281262.0 ( -89.40 by residue)
QMean score : 0.509
|
|
|