Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEITKAKNLGEWLDMRLGTNNLV-KVLMTEYWIPKNINFLWAMGVILLTLLGVLVISGIFLLMYYKPDAKMAFDSVNFTIMQEVAYGWLWRHMHATAASMIFVIIYIHMFVGIYYGSYKKGREMIWISGMILFVVFSAEAFSGYMLPWGQMSYWAAAVITNLFGGIPFIGADVVEWIRGNYVVADSTLTRFFMLHVFLLPIAIILLVGVHFYSLRILHVNNQEGEEIDFELEEKKFIEGKKKESK--VIPFWPVFLSKDIFVVCTFMVFFFYLVCYQYDFAMDPINFERGNSLKTPPHIYPEWYFLWSYEVLRGFFFSAD------LGLMAFGVAQVIFF-------------LLPFLDRSPVVAPAHKRPAFMVWFWLLIIDMIVLTIYGKLPPLGIGKYIGLFGSITFLALFFVVLPIITIAERKKQGGVR |
| 2YIU Chain:A ((17-404)) | -----------RWLHRRLPIVSLVYDTLMIP--TPKNLNWWWIWGIVLAFCLVLQIATGIVLVMHYTPHVDLAFASVEH-IMRDVNGGYMLRYLHANGASLFFLAVYIHIFRGLYYGSYKAPREVTWIVGMLIYLMMMGTAFMGYVLPWGQMSFWGATVITGLFGAIPGVGEAIQTWLLGGPAVDNPTLNRFFSLH-YLLPFVIAALVVVHIWAFHTTGNNNPTGVEVR---------RGSKEEAKKDTLPFWPYFVIKDLFALAVVLVVFFAIVGFMPNYLGHPDNYIEANPLVTPAHIVPEWYFLPFYAILRA--FTADVWVVMLVNWLSFGIIDAKFFGVIAMFGAILVMALVPWLDTSRVRS-GQYRPLFKWWFWLLAVDFVVLMWVGAMPAEGIYPYIALAGSAYWFAYFLIILPLLGIIEKPDAMPQT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -305626 for 2678 contacts (-114.1/contact) +
2D Compatibility (PS) -37053 + (NN) -17156 + (LL) 2608
1D Compatibility (HY) -47600 + (ID) 8250
Total energy: -413077.0 ( -154.25 by residue)
QMean score : 0.352
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