Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIVIKDAHFLTSSNNLSQCPASLTSEMVILGRSNVGKSTFINTLLG-KNLAKSSATPGKTRLANFFSTTWEDKENALTTTFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLIDARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTIHFNALSSKYPTLEIVRQTLLKYLLTNPL
1SUL Chain:A ((3-151))
---VTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLA---------QTLNFY---------IINDELHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEFLKYYGIP---VIVIATKADKIPKGKWDKHAKVVRQTLNIDPEDELILFSSETKKGKDEAWGAIKKMINR-
General information:
TITO was launched using:
RESULT:
Template:
1SUL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79149 for 955 contacts (-82.9/contact) +
2D Compatibility (PS) -14430 + (NN) -2221 + (LL) 1268
1D Compatibility (HY) -8800 + (ID) 2300
Total energy: -105632.0 ( -110.61 by residue)
QMean score : 0.386
(partial model without unconserved sides chains):
PDB file :
Tito_1SUL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SUL-query.scw
PDB file :
Tito_Scwrl_1SUL.pdb
: