Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLAIWQIILLVILAACTILDALTLVIGLNFPVITGTLAGII--MGDMVLGLAIGATLQL-MVLGVGTYGGASIPDFTTGAIVGTVFAVLSGQDAEFAIGLAIPVGLLMVQLDILARFTNTFFLHRIDSNIASGNISAVKRNIWYGALPWALSRAVPVFIMLTFGQSVVDFILNEIPEWLMGGLRVAGGILPVVGIAILLRYLPTNKFVAYLIIGFVAAAYLKVPMLGVALIGVALAIIYFKQNFKNPVAAGANGAALVGEENEDGEYED |
| 3QO6 Chain:A ((139-227)) | ---------------------------GLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLD--SSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRF-------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QO6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67060 for 522 contacts (-128.5/contact) +
2D Compatibility (PS) -8707 + (NN) 2906 + (LL) 15700
1D Compatibility (HY) -800 + (ID) 1200
Total energy: -59161.0 ( -113.34 by residue)
QMean score : 0.027
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