Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVKGDTVGIICCSDGRKKEDENRIALLEQVLKTEFSLQVVFAETIFQKAESPFSGTPQARAIELMKLYQRSDVQMIFDISGGDAANQVLPYLDFDIIRNAQKPFVGYSDLTVILNAIYTKT-----------EQMG---------YNY---QLLHLVGKDSELQQSHFRKTFFENRVLISGE-QLNEFVW-------RGGEVIGGNIRCFLKLAGTNFMPDFT-NKIILLESLGGKEAKLASYVAQLEQLGAFSKCLGVIVGQHSEAEENGEYERIGRLYQQIGRKYKLPIFRTSEIGHSVDAKPCLIGAKVNVSRETLTNF |
| 3T5M Chain:A ((61-321)) | ------------------------------------------------------SGSIQERAKELNALIRNPNVSCIMSTIGGMNSNSLLPYIDYDAFQNNPKIMIGYADATALLLGIYAKTGIPTFYGPALVPSFGEFEPFVDDTYKYFLETLLHDQALPYNIKQPLFWSDEFINWEEKTKEKELRPNNWISVTNGQATGRVIGGNLNTIQGIWGSPYMPCIQEGDILFIEDSSKDAATIERSFSFLKINGVFDKVSGIILGKHEQFDDCGTNRKPYEILLEVLQNQRIPLLADFDCCHTHPMITMPIGVQVKM-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T5M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89418 for 1719 contacts (-52.0/contact) +
2D Compatibility (PS) -24482 + (NN) -8269 + (LL) 5056
1D Compatibility (HY) -14400 + (ID) 3400
Total energy: -134913.0 ( -78.48 by residue)
QMean score : 0.404
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