Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKPSMKRQIAQTGIIHRPLPIETEHALETLAKKKQVLSSRTLFSSKQHVSLEFTHQGAGDFTISGQDEIKLSSPVVMPHWPAGAPDDGDYTNFGNVTISASIGNEDWSGFNRVRIQVFPDFPGVTNPYLMISFKNDGTVKVPDIYGREGVHGVNLINHEWNDVIFEIEGLPRDRMTEMSFSYYLNGPERLTAGTMELFINEIKLEQISEPEISKGWLPQNNTLIYSHNGYSKDMPKVAFCANKHAAT---------TFTIHDKETDKVVF----TGKSYQNATETGNFVILDFSDLQTVGEYYLKF-ADMQTEIFQIGTSEVIWESSIWKSLNFIFCERCGC----PVFG-KHTTCH-------ADIIAEHDGKQLSFNGGWHDAGDVSQQLIQTAEVTMA-------LYEMAAS-----LPEKEETLRMRLLEEGEWGLDFILKTRFGDGFRATSAGMTRWTDGLVGGMDDAIARVHNQAYENFYCAGIEAYIGSQIADNATMQNHLLRIAEEDLLFAIKELEKHGTSQKPIFWEHTYQTSESLYYATASWAASMVYQLTNKEIYAEKAAEWLDLMLEAQEKAGIRDSETSELYKGFFYRDKSHKVIQHFNHQAREHLYLLALEAALETQPSHAEKQTWLQAVEMYGDYLKKVTRFTKPYPLIPAGLYKKDEYLDEASFHLQHLLIDERAIEEYQLQFEQGIKINDEVALRKFPIWFSFRGNNAILLSAGKAASIAGKILKDKALLDIAEGQLQWVIGMNPFGQSMMHGEGYRYAQQYSVLNGEITGEIPVGMETFRNEDEPYWPEFNNATYKEVWVGNAGKWMSIVADLNKITGKS |
3X17 Chain:B ((12-252)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLQGAQILVNQVGYHPATPKQAVLALAPGTAAGIRPGWTPTLQIVRADDGQVVWEGTMAGPSEDRLVSGDTLYRADFTSLTAPGRYVAQVVGGPRSPEFAIGP---VYRDVLYAAARSYYLQRCGVAIDDPITGVSHALDHHEDGYVLVDDPFYRAGTRLEATGGWHDAGDYGKYVTTTA-VTAAQLLKAYELYPQAFADGQLHLPESGNGV-PDILDEVRWGLEWLFRMQRPDGAVYHKLAGLRW---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3X17.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46243 for 1268 contacts (-36.5/contact) +
2D Compatibility (PS) -21442 + (NN) -3764 + (LL) 40780
1D Compatibility (HY) -10000 + (ID) 3000
Total energy: -43669.0 ( -34.44 by residue)
QMean score : 0.181
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