Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSERSLSSRFIEGLSIFAQKISSQKHIMAIRDGFAAMIPITIIAAFFLLVNNVLLQPEN-GLLKFIPNVENYLGVGIQVYNATLGIMAILAAFLIGNFLAKSYGMEGRTEGVIAVAAYVVLIPASSHLMSVDGK-AFEAGGVLTQEMTSSTGMFLAIIAALVSITMLAKFSKSKKLKISMPESVPPAIAKSFNILIPSFLVLSILAIIEVLVVSFVSMSIPEIIVKVLQIPLVGGFQTLPGILLYVFLAGFLWVFGIHGAFVLGAISGPVLLTSLQQNIDAVNAGTALPNIVTQPFLDAFVYMGGGGTIICLVIAIFIASKRPDHRMVTKFGLIPSIFNVSEPLMFGLPVVFNPIYGIPLVIAPLASTAMAYFATSWGWISQTY-ILIPWVTPPVLSGYLATGGDIRASILQIAIIIVGTLIYLPFVLVANRAYVLEQKAAGKVEAVTNGEV |
| 3QNQ Chain:A ((3-434)) | --------RFLEKYVMPVAGKVAEQRHLLAIRDGLVLTMPFLIIGSIFLIISTLP-IPGYSEFMAS-LFGKNWNVALGYPVSATFNIMALIAVFGIAYRLGEYYKVDALASGALSLVTFLLATPFQVAYIMPGTKESILVDGVIPAALMGSQGLFVAMIIAIISTEIYRFLVQK-KMIIKMPETVPPAVTRSFAALIPGFIVVTVVWIIRLIFEHTTFGSIHNVVGKLLQEPLSILGASLWGAVIAVILVHVLWACGIHGATIVGGVMSPIWLSLMDQNRIAFQAGQDVPNTITAQFFDLWIYMGGSGATLALVVGMLLFARSQQLKSLGRLSIAPGIFNINEMVTFGMPIVMNPLLLIPFIVVPVVLTIVSYFAMEWGLVARPSGAAVTWTTPILFSGYLGSGGKISGVILQLVNFALAFVIYLPFLKIWDKQKIAEEKGEA---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QNQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -409220 for 3622 contacts (-113.0/contact) +
2D Compatibility (PS) -44180 + (NN) -9985 + (LL) 1712
1D Compatibility (HY) -44400 + (ID) 6700
Total energy: -512773.0 ( -141.57 by residue)
QMean score : 0.353
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