Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VDFITYIIDFILHIDQHLVEIINNFGIWTYIILFLIVFIETGLVVFPFLPGDSLLFAAGALSVLDGSILHIVPLIITLWLAAVLGDTVNYHIGKKIGTSIPEDSWFGKLINKEKMEKAEAFFNKHGGKTIFIARFMPFIRTFAPFVAGASRMNYRYFLNYNILGATVWVLLCTLAGYFFGNFPIVKDNFSLVVIGIIVVSVIPMVVSFIKSKMDKKSAE |
2K9J Chain:B ((715-722)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WKLLITIH------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K9J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -254 for 22 contacts (-11.5/contact) +
2D Compatibility (PS) -718 + (NN) 959 + (LL) 17464
1D Compatibility (HY) -800 + (ID) 0
Total energy: 16651.0 ( 756.86 by residue)
QMean score : 0.139
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