Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMNRVVLVGRLTKDPELRYTPAGVAVATFTLAVN-RTFTNQQGER---EADFINCVVWRKPAENVANFLKKGSMAGVDGRVQTRNYEGNDGKRVYVTEIVAESVQFLEPRNSNGGGGNNYQSGNNNNNYNSGGNNFGQAPTNNGGFGQDQQQSQNQNYQSTNNDPFASDGKPIDISDDDLPF
3A5U Chain:A ((7-101))
----ITVVGNLTADPELRFTPSGAAVANFTVASTPRMFDRQSGEWKDGEALFLRCNIWREAAENVAESLTRGSRVIVTGRLKQRSF-TREGEKRTVVEV-----------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3A5U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40040 for 515 contacts (-77.7/contact) +
2D Compatibility (PS) -9833 + (NN) -3378 + (LL) -232
1D Compatibility (HY) -5600 + (ID) 2200
Total energy: -61283.0 ( -119.00 by residue)
QMean score : 0.613
(partial model without unconserved sides chains):
PDB file :
Tito_3A5U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A5U-query.scw
PDB file :
Tito_Scwrl_3A5U.pdb
: