Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYKKLATVGMTVLLVGALSACSFNDDKDTSSNNSNNETTSSKSSNNESSSDSLQNKSLDMSYEDAINAFKDKHSDAEISSVELEKSLGKYVYKVDGISNDNEYEMKFNAETKEQLSDETDRLDREDAGGVEKENEKLSLDG--IKSPKEAMDKAVSEQAGDVTSWKIERELDTTYYEVTVKQDNNKYEIKLNAKTLEILQTEQDD |
2KJP Chain:A ((16-70)) | -------------------------------------------------------------------------------------------------------------------------------GKIEVGDKIISADGKNYQSAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQ----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KJP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11952 for 242 contacts (49.4/contact) +
2D Compatibility (PS) -5726 + (NN) -404 + (LL) 7536
1D Compatibility (HY) -1600 + (ID) 950
Total energy: 10808.0 ( 44.66 by residue)
QMean score : 0.307
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