Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LAKNTHMNVTVDFTNWGASKYD-LRIPVHQPIKALIINLAETLKIDYKDLSKCTIKTTNKAILLSDDDKLTNFQIADGDILEIL
1WGG Chain:A ((3-75))
-SGSSGYSVTVKWG---KEKFEGVELNTDEPPMVFKAQLFALTGVQ-----PARQKVMVKGGTLKD-DDWGNIKMKNGMTVLM-
General information:
TITO was launched using:
RESULT:
Template:
1WGG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45989 for 463 contacts (-99.3/contact) +
2D Compatibility (PS) -7417 + (NN) -1517 + (LL) 408
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -57565.0 ( -124.33 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_1WGG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WGG-query.scw
PDB file :
Tito_Scwrl_1WGG.pdb
: