Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYFVYDIGGTFVKFALMENNGTVKMKDKFPTTAKSAEELVAQMV----EKWRPYRTE---VKGIAVSCPGVVDTEKGVIYQGGSLLFMHEKNLA--EMLARECHVPVVLQNDAKSAALAELWLGVAKNVHSAAILTLGSGVGGGIIMDGKLQSGYHLMAGEVSFMETSFDTKKLRGTFFG--RTGSAVELIKRIASKKNLPNKKDGEHVFELIN---------QGDEEANAIFDAYIYELASQILNIQYLIDPEIIAIGGGIS-AQPVVVERLNDAVAEIKAANPYHAAQPKIVTCHFQNDANLYG------ALYNFFLQMDAQNKR |
| 1Z05 Chain:A ((110-424)) | -FLSMRLGRGYLTIALHELGGEVLIDTKIDIHEIDQDDVLARLLFEIEEFFQTYAAQLDRVTSIAITLPGLVNSEQGIVLQ---MPHYNVKNLALGPEIYKATGLPVFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQIDPQGKRCHCGNYGCLETVASSQAIRDQVTARIQAGEPSCLATVEEISIEDICAAAADGDPLAVDVIQQLGRYLGAAIAIVINLFNPEKILIGGVINQAKSILYPSIEQCIRE--QSLPVYHQDLKLVESRFYKQATMPGAALIKQALYDGLLLM------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z05.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166021 for 2245 contacts (-74.0/contact) +
2D Compatibility (PS) -30717 + (NN) -10120 + (LL) 376
1D Compatibility (HY) -20400 + (ID) 3750
Total energy: -230632.0 ( -102.73 by residue)
QMean score : 0.479
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