Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLHTIDFSDIFSSDYSSKISFKKGEIIHSYRDYEEKAPQIGAILEGTAVLEGPTNEGRWMINALIGQHALFGMESLLETKTAPELTEYRVRALENGTVLFIDREFLLNYLYANPQFFHLILDEVIVRYLFTSKNYKNINQAPI-VKVTRILVEIIELLHLHQTEGSIELPVYVTQTFLADYCRSSRARVTEVLEELRESGLL-LSKKPITISSHENLLDQVDSFQTGNGLLTR
2XKP Chain:A ((27-211))
--------------------FERGKTIFFPGDPAER---VYLLVKGAVKLSRVYESGEEITVALLRENSVFGVLSLLT--RSDRF--YHAVAFTPVQLFSVPIEFMQKALIERPELANVMLQGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGIPSPDG-ITIDLKLSHQAIAEAIGSTRVTVTRLLGDLRESKLIAIHKKRITV----------------------
General information:
TITO was launched using:
RESULT:
Template:
2XKP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117040 for 1280 contacts (-91.4/contact) +
2D Compatibility (PS) -18891 + (NN) -3276 + (LL) 2364
1D Compatibility (HY) -15200 + (ID) 2150
Total energy: -154193.0 ( -120.46 by residue)
QMean score : 0.275
(partial model without unconserved sides chains):
PDB file :
Tito_2XKP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XKP-query.scw
PDB file :
Tito_Scwrl_2XKP.pdb
: