Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDRKLLKEKQIQLIFQLEQEENRFIRKRLIEELEFFEALGDREKGLLTAEQKLLILTPSEYREYKRTKSDVQISRIIGVSRSSLAEWKRKKGLN-------RKKSQPVQQEMIDVLAFHLDKTKEEIGALPA--SAIECQYEAFVINEANN
4DLB Chain:A ((237-306))
-------------------------------------------------------------------------SRIIGIDIDS-KKFDRAKNFGVTEFINPKEHEQPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGW-------
General information:
TITO was launched using:
RESULT:
Template:
4DLB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8100 for 314 contacts (-25.8/contact) +
2D Compatibility (PS) -6427 + (NN) -1863 + (LL) 7804
1D Compatibility (HY) -4800 + (ID) 1050
Total energy: -14436.0 ( -45.97 by residue)
QMean score : 0.213
(partial model without unconserved sides chains):
PDB file :
Tito_4DLB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DLB-query.scw
PDB file :
Tito_Scwrl_4DLB.pdb
: