Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDLFLELNGKVHSLSETFPGLSVQEV-SRQSPQLSMETAEIAGTDGVIPGMTQFKPFIFSAKCNLQAL-DIPDYHLAVREIYEFLFQRDSYYIWSDQMPGIRYEVHPKPVDFSRESDRVGLLTIEFDVFKGYAESRGTSLDPMTFEVDLWQMGMNLSNRDDLFYIFKENTFRVYNAGSDRVNPLMRHELDIAM-TAN--GTPTIHNL-TTGESFEYQKELRKTDVLLLNN--IYPLVNNRRVGK--DTNHGIITLEKGWNDFEIKGVTDVTIAFNFPFIYR |
| 2X8K Chain:A ((24-253)) | ---------------------FLVQEVRGRSVYSIEMGKRTIAGVDGGVITTESLPARELEVDAIVFGDGTETDLRRRIEYLNFLLHRDTDVPITFSDEPSRTYYGRYEFATEGD---GFHKVTLNFYCQDPLKYGPEVTTDV------------------------TTASTPVKNTGLAVTNPT----IRCVFSTSATEYEMQLLDGSTVVKFLKVVYGFNTGDTLVIDCHERSVTLNGQDIMPALLIQSDWIQLKPQVNTYLKATQP-STIVFTEKFL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56136 for 1387 contacts (-40.5/contact) +
2D Compatibility (PS) -22882 + (NN) 3005 + (LL) 3564
1D Compatibility (HY) -5200 + (ID) 1800
Total energy: -79449.0 ( -57.28 by residue)
QMean score : 0.327
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