Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDYVIIQSMDKEVEEILTDIDYGSFSYDYEKNT-SRAISFTVNKTKQNAAIFDLVGNEAILTY--QGQ---QFVIKKCTPKSIGGTLSKQITAQHICYTVQDHVQYNVKSGRKKYSIQTVLEFALQDNVLG-FSYE-IQG--SFPLVELEDLGNKNGLELVNLCLEEFGAILFAD-NKKLYFYDEKSWYVKTEKQFR-----YLYNTEEVSVDTNTDNLKTEIKCYGKQKENADKLTGDNKYMAVVTYTSPNEAIYGKRMANAKSDDKITNNDDLLIFAKKQILDV--PETALTISYKGK-----EPVSERDVWYFIHEPMGFETEVKVTKIKSSHP-WSKKFQEIGFSNSRRDMVRIQTQIANQVKKASVDTNKINSFSSIAMNAYDSRILTEVVGVVDGD |
| 3D37 Chain:A ((24-340)) | -----------------------RYDIDSDFLIPADSFDFVIGR---------PDLSGESCEVVIDGQIVMTGIIGSQRHGKSKGSRELSLSGRDLAGFLVDCSAPQLN--VKGMTVLDAAKKLAAPW--PQIKAVVLKAENNPALGKIDIEPGETVWQALTHIANSVGLHPWLEPDGTLVVGGAD-YSSPPVATLCWSRTDSRCNIERMDIEWDTDNRFSEVTFLAQSHG----------HDLKWVYKDPTMTLHRPK---TVVVS--DNLAALQKQAKKQLADWRLEGFTLTITVGGHKTRDGVLWQPGLRVHVIDDEHGIDAVFFLMGRRFMLSRMDGTQTELRLKEDGI------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D37.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35809 for 1983 contacts (-18.1/contact) +
2D Compatibility (PS) -29964 + (NN) -4019 + (LL) 7004
1D Compatibility (HY) -4000 + (ID) 1650
Total energy: -68438.0 ( -34.51 by residue)
QMean score : 0.282
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