Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLDLWKWEMLLQGREFRNKTNDNWQKLMDWSDF----ISTGL-SAIYVYVNKADATLNNKIDT---VDKAVNARVNELISGTEQLS-EVVDARSDAFGARYPVLRERLNQEQLNFSKKSTIQFDASTIISMEKQDIGLLTSKKISEAQTVCFLNISSLDEEADIVLEKTGETSFSDNLTSLVFAKIGTNERYQMEPVGA |
1G9H Chain:A ((338-427)) | ------RWSYIAGGVDFRNNTADNW-AVTNWWDNTNNQISFGRGSSGHMAINKEDSTLTATVQTDMASGQYCNVLKGELSADAKSCSGEVITVNSDG------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1G9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5435 for 441 contacts (-12.3/contact) +
2D Compatibility (PS) -8617 + (NN) -1487 + (LL) 8284
1D Compatibility (HY) -2800 + (ID) 1450
Total energy: -11505.0 ( -26.09 by residue)
QMean score : 0.149
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