Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKIWIDAGHGG-----------------KDSGASG----NGLVEKNWVLTVAKQLQTELVKAGFEVGMTRTNDTFYE--LSDRAKKANSFKADLFISLHFNAGGGKGYEDYI-YTSVPAATVEIQKIIHKNIITKVTKHGMNDRGMKKANF------------AVLRETAMDAILLEAG-FCDSTDALILEKKAYQTDYCLGIVSAVQEIFGAMVTKYRAGKYLTSDDAISGTNIKGYLEAGTKVFVYKETEKTLNLTTTKGVPGSWVLKTEVNTGKR |
4M6G Chain:A ((13-214)) | ---VFIDPGHNGANDASIGRQVPTGRGGTKNCQASGTSTNSGYPEHTFTWETGLRLRAALNALGVRTALSRGNDNALGPCVDERANMANALRPNAIVSLHADGGPASGRGFHVNYSAPPLNAIQAGPSVQ---FARIMRDQLQASGIPKANYIGQDGLYGRSDLAGLNLAQYPSILVELGNMKNPADSALMESAEGRQKYANALVRGV----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M6G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79932 for 1327 contacts (-60.2/contact) +
2D Compatibility (PS) -17280 + (NN) -4136 + (LL) 4724
1D Compatibility (HY) -7200 + (ID) 2150
Total energy: -105974.0 ( -79.86 by residue)
QMean score : 0.343
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