Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDISSTEIWDAIRRNSYLLYYQPKVDAKTNKIIGFEGLVRLKTAT-TILAPIDFFDDIVLLNATREMQDFVAETAIKQINQLGGR----FSISINIPAHYVASSTYMTFLHDYVKEHLKYPECLEIEIIERGEITELAIADKNLRKIKDLGVKVSMDDFGKGYSSLAYLRSLPIDIVKTDMSFIALLKTDRKQQIIIRAIVNLCHDLGGKVVTEGVEDMEQVEKLREMKVDYFQGYYFSRPLPMEEIKQKYSIV |
| 4RNF Chain:A ((203-449)) | -----SDLRRALELGEFVLHYQPQFTGDGRRLTGAEALLRWQHPRRGLVPPSEFIPVLEEIGLVAQVGDWLLAEACKQLRSWHKAKVRVPKVSVNLSARQFADGQLGERIAAILYETGIPPACLELELTESILMSDVAEAMQILSGLKRLGLAIAVNNFGTGYSSLNYLKQFPIDVLKIDRSFVDGLPHGEQDAQIARAIIAMAHSLNLMVIAEGVESQAQLDFLREHGCDEVQGYLFGRPMPAEQFGMLYA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RNF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115232 for 1924 contacts (-59.9/contact) +
2D Compatibility (PS) -25556 + (NN) -6161 + (LL) 676
1D Compatibility (HY) -19600 + (ID) 3700
Total energy: -169573.0 ( -88.14 by residue)
QMean score : 0.451
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